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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs143175891 chr2:109440452 TG/T 2.91E-12 505 37.75 25.78 2.3 KM Plot
KIRC rs143198266 chr5:59066549 C/CA 0 496 36.97 39.53 0.07 KM Plot
KIRC rs143299891 chr3:48279272 A/AT 1.74E-5 501 37.7 37.6 19.13 KM Plot
KIRC rs143517225 chr16:2965026 A/AT 3.43E-7 500 37.03 37.82 3.37 KM Plot
KIRC rs143535224 chr2:109397050 A/G 3.05E-12 507 37.77 26.17 2.3 KM Plot
KIRC rs143664939 chr11:34762982 C/T 8.85E-8 504 37.47 33.35 3.3 KM Plot
KIRC rs143894549 chr19:37716679 ATCAT/A 7.41E-5 502 40 30.6 20 KM Plot
KIRC rs144710026 chr6:34990307 CAAAG/C 0 503 37.53 37.03 1.43 KM Plot
KIRC rs144801446 chr18:33211413 G/C 3.23E-5 509 37.75 31.77 7.37 KM Plot
KIRC rs144838602 chr9:92166330 C/A 2.63E-5 507 36.88 48.2 10.62 KM Plot
KIRC rs144852007 chr3:194931301 A/ATTAC 7.21E-9 505 37.47 33.7 6.33 KM Plot
KIRC rs144897437 chr11:34780968 G/GAGAGAATT 1.02E-7 503 37.67 34.47 3.3 KM Plot
KIRC rs145048348 chr10:32926331 T/C 1.32E-13 497 37.7 34.13 1.97 KM Plot
KIRC rs145115545 chr2:109511467 GACTC/G 6.77E-12 509 37.73 26.43 2.3 KM Plot
KIRC rs145128757 chr2:109360761 G/A 3.05E-12 507 37.77 26.17 2.3 KM Plot